jQuery and SWFObject Conflict
The problem was found only in IE (sound familiar?) with the following code:
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When the ‘submitButton’ was clicked, this function was not firing in IE. After some googling I found that there is a slight conflict with jQuery and SWFObject. I tested this and found the problem in jQuery 1.1.x and 1.2.1.
I found the fix on the SWFObject forums which is basically using jQuery to load the .swf:
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All good in all browsers :)